Partek Course on Microarray and NGS

Course date: 24 March 2015 - 25 March 2015
Location: Erasmus MC

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Introduction
Partek's two-day workshop provides an introduction to analysis of high-throughput genomics data (next-generation sequencing (NGS) and microarrays), with particular emphasis on gene expression. Topics include: experimental design, processing of NGS data, alignment and mapping, exploratory data analysis, statistical analysis of high-throughput data, biological interpretation, pathway analysis, data integration (e.g. miRNA and gene expression), and data visualization. This workshop is intended for those with novice or intermediate data analysis skills, but requires a basic understanding of microarray and NGS technologies.

Target audience
This workshop is intended for those with novice or intermediate data analysis skills but, requires a basic understanding of microarray and NGS technologies.

Detailed course program.

Day 1: Microarray

9:30 - 10:30 Introduction to Data Analysis with Partek tools
10:30 - 10:45 break
10:45 - 12:00 Gene Expression Analysis
12:00 - 13:00 lunch break
13:00 - 13:45 MicroRNA to Gene Expression Integration
13:45 - 14:00 break
14:00 - 15:30 Data Visualization

Day 2: NGS

9:30 - 10:30 Introduction to NGS Data Analysis
10:30 - 11:00 break
11:00 - 12:30 NGS Workflow
12:30 - 13:30 lunch break
13:30 - 15:00 RNA-seq Analysis



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