Workshop Ingenuity Pathway Analysis (IPA)

Course date: 15 November 2016 - 15 November 2016
Location: Erasmus MC, Ee-15.28

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Click here to register for this course

Attached is an old program to give you an impression

One-day hands-on training workhop by the team from Ingenuity about Ingenuity Pathway Analysis (IPA).

IPA Training – Tuesday 15th of November  
This hands-on training workshop will introduce new users to Ingenuity Pathway Analysis ( for the biological interpretation of ‘omic data, and provide additional information for inexperienced users of the system. The training will use an RNA-Seq data set as a case study. For example, the temporal transcriptional changes observed during the differentiation of mouse embryonic stem cells to cardiomyocytes. The course will also highlight the considerations when analysing and integrating other data types such as proteomics or metabolomics data, and will touch on the analysis of miRNA.

Course Topics:

  • Introduction to QIAGEN Sample to Insight and Ingenuity Pathway Analysis (IPA)
  • Uploading data and running a Core Analysis
  • Interpreting a Core Analysis
    o Canonical Pathways Analysis
    o Upstream Regulator Analysis
    o Functional Analysis
    o Molecular Network Analysis
  • Search & Pathway Building; Search & Explore case study
  • Comparison Analysis
  • Sharing & Collaboration
  • Best Practice Tips & Tricks
  • Overview of other IPA analysis tools

Course times
9.30 - 17.00 hours

Course location
Computer room Ee-1528, Bioinformatics dept., Medical Faculty, Erasmus MC

For this course you will receive a certificate of attendance with 0,4 ECTS for full participation.

Registration fee
The subscription fee of non-commercial participants for this course is € 200.

Discounts are handled as follows:

  • All PhD students get a discount of 50% and pay €100.
  • All participants from the postgraduate school MolMed receive a discount of 100% and pay €0.
  • Master students from elsewhere who will need to pay the fee themselves, receive a discount of 75% and pay €50,00.

General information
Financial regulation of the Postgraduate School Molmed

From August 1st, 2012 the following financial rules apply:

Non-commercial course, symposium or workshop fee: €200/day, €750/week

• Participants of the postgraduate school MolMed: discount of 100%.
• PhD students and Master’s students, regardless of institution: discount of 50%.
• Master’s students who are paying the fee from their personal budget: discount of 75%. When you will pay from your personal budget you need to provide us your home address details for the invoice

There is one fee for the entire course. There is no reduction for partial participation.

The SPSS Course and the R Course have shorter course days. The SPSS Course counts as a 2-days course and the R Course as a 3-days course.

Commercial participants & sponsors: companies are invited to inquire about commercial participant tuition fees and about sponsoring.

Those who register for a course, symposium or workshop agree with these financial conditions.













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